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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs8043253 chr15:41503730 C/T 0.000247 483 15.3 15.33 17.77 KM Plot
THCA rs804660 chr1:41572164 T/C 3.69E-12 488 17.7 17.77 14.93 KM Plot
THCA rs804661 chr1:41571681 T/G 4.94E-7 487 17.93 17.77 14.93 KM Plot
THCA rs8047421 chr16:50129265 A/G 0.000257 490 15.67 16.37 13.6 KM Plot
THCA rs8052350 chr16:50139285 G/A 0.000196 483 14.83 16.62 15.63 KM Plot
THCA rs8054241 chr16:20892591 T/G 9.14E-5 490 16.37 14.7 17.65 KM Plot
THCA rs8062151 chr16:50130512 T/C 0.000257 490 13.6 16.37 15.67 KM Plot
THCA rs8076273 chr17:16941347 G/C 0.000146 482 16.33 16.13 13.18 KM Plot
THCA rs8078599 chr17:37518660 C/T 0.000263 484 15.8 16.37 15.83 KM Plot
THCA rs808186 chr6:119155539 A/G 0.000271 483 16.33 14.23 21.77 KM Plot
THCA rs8085103 chr18:21170401 C/T 9.98E-8 467 15.67 16.83 13.98 KM Plot
THCA rs8085704 chr18:21170870 C/T 9.31E-8 465 15.48 16.92 14 KM Plot
THCA rs8085755 chr18:21170529 A/G 7.29E-7 468 15.23 16.92 14.15 KM Plot
THCA rs8109820 chr19:53674839 G/A 3.05E-6 471 16.2 16.67 11.73 KM Plot
THCA rs8113324 chr19:49354522 C/T 7.29E-5 490 17.77 14.93 15.93 KM Plot